Folders should be created manually.
For example, there is domain one.com.
If autosubdomains in separate directory is enabled for this domain, then needs to create directory for subdomain
/var/www/user/data/www/sub.one.com - for subdomain sub.one.com
If autosubdomains in the domains subdirectory is enabled for this domain, then needs to create directory for subdomain
/var/www/user/data/www/one.com/sub - for subdomain sub.one.com
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